Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav23A0A0G2JG17 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav23A0A0G2JG17 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav23A0A0G2JG17 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav23A0A0G2JG17 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav23A0A0G2JG17 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav23A0A0G2JG17 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav23A0A0G2JG17 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.37■□□□□ 0.05
Trav23A0A0G2JG17 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav23A0A0G2JG17 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Gm42642-201ENSMUST00000200683 355 ntBASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.36■□□□□ 0.05
Trav23A0A0G2JG17 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Gm18671-201ENSMUST00000214826 683 ntBASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav23A0A0G2JG17 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Reep4-203ENSMUST00000226563 1444 ntBASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav23A0A0G2JG17 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav23A0A0G2JG17 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav23A0A0G2JG17 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav23A0A0G2JG17 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav23A0A0G2JG17 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav23A0A0G2JG17 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav23A0A0G2JG17 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav23A0A0G2JG17 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav23A0A0G2JG17 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav23A0A0G2JG17 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav23A0A0G2JG17 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav23A0A0G2JG17 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav23A0A0G2JG17 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav23A0A0G2JG17 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Gm42569-201ENSMUST00000200539 472 ntBASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav23A0A0G2JG17 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms