Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13n-4A0A0G2JG01 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-4A0A0G2JG01 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-4A0A0G2JG01 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Gm10033-202ENSMUST00000211874 928 ntBASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Gm9988-201ENSMUST00000069786 435 ntBASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 AA386476-201ENSMUST00000098781 1665 ntBASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-4A0A0G2JG01 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-4A0A0G2JG01 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-4A0A0G2JG01 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-4A0A0G2JG01 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav13n-4A0A0G2JG01 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-4A0A0G2JG01 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-4A0A0G2JG01 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms