Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gm14117-201ENSMUST00000122417 843 ntBASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 BC021767-201ENSMUST00000126387 1716 ntBASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms