Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-2A0A0G2JF93 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-2A0A0G2JF93 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13n-2A0A0G2JF93 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13n-2A0A0G2JF93 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13n-2A0A0G2JF93 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trav13n-2A0A0G2JF93 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13n-2A0A0G2JF93 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13n-2A0A0G2JF93 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13n-2A0A0G2JF93 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Mir6236-201ENSMUST00000184437 123 ntBASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-2A0A0G2JF93 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-2A0A0G2JF93 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms