Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm9988-201ENSMUST00000069786 435 ntBASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm27405-201ENSMUST00000184201 112 ntBASIC13.96□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.96□□□□□ -0.17
Trbv13-1A0A0B4J1P8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Gm27801-201ENSMUST00000184174 223 ntBASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.93□□□□□ -0.18
Trbv13-1A0A0B4J1P8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.93□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Gm10033-202ENSMUST00000211874 928 ntBASIC13.93□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Gm10849-201ENSMUST00000100397 618 ntBASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-1A0A0B4J1P8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms