Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trav4-3A0A0B4J1K1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gm43530-201ENSMUST00000195920 274 ntBASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-3A0A0B4J1K1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-3A0A0B4J1K1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-3A0A0B4J1K1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.83□□□□□ -0.35
Trav4-3A0A0B4J1K1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav4-3A0A0B4J1K1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav4-3A0A0B4J1K1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav4-3A0A0B4J1K1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav4-3A0A0B4J1K1 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.83□□□□□ -0.36
Trav4-3A0A0B4J1K1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12.83□□□□□ -0.36
Trav4-3A0A0B4J1K1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-3A0A0B4J1K1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Trav4-3A0A0B4J1K1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms