Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gm6420-201ENSMUST00000193885 723 ntBASIC16.65■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gm42569-201ENSMUST00000200539 472 ntBASIC16.65■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.65■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Iqck-206ENSMUST00000208658 2891 ntBASIC16.63■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.63■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.63■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Gm27405-201ENSMUST00000184201 112 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms