Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6n-6A0A075B6B2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6n-6A0A075B6B2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6n-6A0A075B6B2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav6n-6A0A075B6B2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6n-6A0A075B6B2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6n-6A0A075B6B2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6n-6A0A075B6B2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav6n-6A0A075B6B2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6n-6A0A075B6B2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6n-6A0A075B6B2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6n-6A0A075B6B2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav6n-6A0A075B6B2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Trav6n-6A0A075B6B2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6n-6A0A075B6B2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.96□□□□□ -0.18
Trav6n-6A0A075B6B2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6n-6A0A075B6B2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.96□□□□□ -0.18
Trav6n-6A0A075B6B2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6n-6A0A075B6B2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6n-6A0A075B6B2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Gm12821-201ENSMUST00000120022 600 ntBASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Mir6236-201ENSMUST00000184437 123 ntBASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav6n-6A0A075B6B2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms