Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Gm12251-201ENSMUST00000117893 792 ntBASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-7A0A075B6B0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Gm43060-201ENSMUST00000200621 289 ntBASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6d-7A0A075B6B0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-7A0A075B6B0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 AA386476-201ENSMUST00000098781 1665 ntBASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-7A0A075B6B0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms