Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-5A0A075B621 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-5A0A075B621 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-5A0A075B621 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-5A0A075B621 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Gm12366-201ENSMUST00000121722 873 ntBASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Gm5786-201ENSMUST00000085368 882 ntBASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-5A0A075B621 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav6n-5A0A075B621 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6n-5A0A075B621 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6n-5A0A075B621 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.58□□□□□ -0.07
Trav6n-5A0A075B621 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
Trav6n-5A0A075B621 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6n-5A0A075B621 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Trav6n-5A0A075B621 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Gm9870-201ENSMUST00000063874 645 ntBASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-5A0A075B621 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-5A0A075B621 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav6n-5A0A075B621 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav6n-5A0A075B621 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-5A0A075B621 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-5A0A075B621 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-5A0A075B621 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms