Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav1A0A075B5Z4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav1A0A075B5Z4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav1A0A075B5Z4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav1A0A075B5Z4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.53■□□□□ 0.4
Trav1A0A075B5Z4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav1A0A075B5Z4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav1A0A075B5Z4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav1A0A075B5Z4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav1A0A075B5Z4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav1A0A075B5Z4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav1A0A075B5Z4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav1A0A075B5Z4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav1A0A075B5Z4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav1A0A075B5Z4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav1A0A075B5Z4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav1A0A075B5Z4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav1A0A075B5Z4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav1A0A075B5Z4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav1A0A075B5Z4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav1A0A075B5Z4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav1A0A075B5Z4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.5■□□□□ 0.39
Trav1A0A075B5Z4 Gm38205-201ENSMUST00000192243 258 ntBASIC17.5■□□□□ 0.39
Trav1A0A075B5Z4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav1A0A075B5Z4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav1A0A075B5Z4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Gm43060-201ENSMUST00000200621 289 ntBASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav1A0A075B5Z4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.48■□□□□ 0.39
Trav1A0A075B5Z4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms