Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv4A0A075B5I2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.94■□□□□ 0.62
Trbv4A0A075B5I2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv4A0A075B5I2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv4A0A075B5I2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv4A0A075B5I2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.94■□□□□ 0.62
Trbv4A0A075B5I2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv4A0A075B5I2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv4A0A075B5I2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv4A0A075B5I2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv4A0A075B5I2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv4A0A075B5I2 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.91■□□□□ 0.62
Trbv4A0A075B5I2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv4A0A075B5I2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trbv4A0A075B5I2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv4A0A075B5I2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Trbv4A0A075B5I2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.91■□□□□ 0.62
Trbv4A0A075B5I2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.91■□□□□ 0.62
Trbv4A0A075B5I2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
Trbv4A0A075B5I2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv4A0A075B5I2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv4A0A075B5I2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv4A0A075B5I2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv4A0A075B5I2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv4A0A075B5I2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv4A0A075B5I2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv4A0A075B5I2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trbv4A0A075B5I2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.9■□□□□ 0.62
Trbv4A0A075B5I2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv4A0A075B5I2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv4A0A075B5I2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv4A0A075B5I2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Trbv4A0A075B5I2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv4A0A075B5I2 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.89■□□□□ 0.61
Trbv4A0A075B5I2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv4A0A075B5I2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv4A0A075B5I2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv4A0A075B5I2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv4A0A075B5I2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv4A0A075B5I2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv4A0A075B5I2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv4A0A075B5I2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trbv4A0A075B5I2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv4A0A075B5I2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.88■□□□□ 0.61
Trbv4A0A075B5I2 Gm9988-201ENSMUST00000069786 435 ntBASIC18.88■□□□□ 0.61
Trbv4A0A075B5I2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.88■□□□□ 0.61
Trbv4A0A075B5I2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv4A0A075B5I2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv4A0A075B5I2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv4A0A075B5I2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv4A0A075B5I2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv4A0A075B5I2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.87■□□□□ 0.61
Trbv4A0A075B5I2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv4A0A075B5I2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv4A0A075B5I2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv4A0A075B5I2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv4A0A075B5I2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv4A0A075B5I2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Reep4-203ENSMUST00000226563 1444 ntBASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv4A0A075B5I2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms