Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Pygb-201ENSMUST00000045441 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gimap6-201ENSMUST00000053661 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Nbr1-205ENSMUST00000107212 4168 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Ndufa9-203ENSMUST00000205002 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Retreg1-203ENSMUST00000226438 2783 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm525-201ENSMUST00000100619 557 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Chn2-203ENSMUST00000114401 1269 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm25507-201ENSMUST00000116981 144 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm12470-201ENSMUST00000117239 1049 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm8569-201ENSMUST00000117630 647 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm15005-201ENSMUST00000117639 512 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm12004-201ENSMUST00000117869 718 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm14576-201ENSMUST00000118073 1111 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm12210-201ENSMUST00000118245 153 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm14182-201ENSMUST00000119334 210 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm13203-201ENSMUST00000139895 520 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm24013-201ENSMUST00000157727 99 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm3123-201ENSMUST00000163480 480 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm17655-201ENSMUST00000167969 255 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm14996-201ENSMUST00000178488 512 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm14992-201ENSMUST00000179437 512 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm7784-201ENSMUST00000180769 989 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm26954-202ENSMUST00000182753 762 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 2010009K17Rik-201ENSMUST00000186977 567 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm29474-201ENSMUST00000187688 379 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm28618-201ENSMUST00000189283 567 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm28396-201ENSMUST00000190309 379 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm37442-201ENSMUST00000191915 567 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm38390-201ENSMUST00000194859 1065 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm44331-201ENSMUST00000203217 388 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Nbdy-206ENSMUST00000208373 1061 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 1700019A23Rik-201ENSMUST00000208842 196 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm6333-201ENSMUST00000218775 796 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 AC211878.5-201ENSMUST00000221697 409 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 AC140210.1-201ENSMUST00000224961 534 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 AC144949.1-201ENSMUST00000225358 422 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 AC123698.1-201ENSMUST00000227090 402 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 AC136376.1-201ENSMUST00000228496 950 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Rbm26-204ENSMUST00000163545 3270 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm15169-202ENSMUST00000130794 2335 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Rrm2-201ENSMUST00000020980 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Zfp69-202ENSMUST00000106281 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm43756-201ENSMUST00000199788 2838 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm44763-201ENSMUST00000208287 2019 ntBASIC8.32□□□□□ -1.08
Trim39Q9ESN2 L1td1-202ENSMUST00000154279 2942 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Zfand1-201ENSMUST00000037839 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm15342-201ENSMUST00000146222 2100 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Trip4-203ENSMUST00000122410 3915 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Sult6b2-201ENSMUST00000111768 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gigyf2-217ENSMUST00000174501 3876 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm43593-201ENSMUST00000198605 1346 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Pcdh15-210ENSMUST00000125517 3074 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm3822-201ENSMUST00000201941 2935 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Vnn1-201ENSMUST00000041416 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Rnf38-204ENSMUST00000107836 1694 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm19001-201ENSMUST00000222736 1651 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 AC156790.4-202ENSMUST00000228838 1418 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 C5ar2-202ENSMUST00000171425 3381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm3594-202ENSMUST00000171784 1759 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm42944-201ENSMUST00000198383 3980 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm4640-201ENSMUST00000203927 2352 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Mgat5-202ENSMUST00000171405 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 C2cd5-202ENSMUST00000111758 4062 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Tma7-ps-201ENSMUST00000118448 195 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms