Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm29630-201ENSMUST00000185761 359 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm5511-201ENSMUST00000189380 802 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm42720-201ENSMUST00000196813 300 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm20568-201ENSMUST00000197129 208 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm45458-201ENSMUST00000209900 522 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm18591-201ENSMUST00000220568 763 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 CT485612.1-201ENSMUST00000222555 382 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 AC114008.1-201ENSMUST00000226193 937 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Pqbp1-201ENSMUST00000033497 1104 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Ang2-201ENSMUST00000051274 438 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Adam9-201ENSMUST00000084032 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Pcnp-201ENSMUST00000096021 608 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Tsnaxip1-201ENSMUST00000034365 2210 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm16211-201ENSMUST00000147722 1620 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gzmb-201ENSMUST00000015581 1436 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm42435-201ENSMUST00000196630 1448 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Xndc1-202ENSMUST00000106950 3131 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm15728-201ENSMUST00000140833 3492 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Caps2-203ENSMUST00000170013 2321 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm37842-201ENSMUST00000192330 1569 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Galnt7-201ENSMUST00000034021 4313 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 4933427I22Rik-202ENSMUST00000153921 1378 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Ivl-201ENSMUST00000053107 1922 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Bbs9-201ENSMUST00000039798 3382 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Nme7-207ENSMUST00000193683 1740 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Platr1-201ENSMUST00000188474 3316 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm10538-201ENSMUST00000189499 1877 ntTSL 2 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Mrpl48-201ENSMUST00000064334 1865 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 AC164297.4-201ENSMUST00000224225 1307 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Katnal2-201ENSMUST00000026486 1674 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm43621-201ENSMUST00000202733 2022 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 1700024J04Rik-201ENSMUST00000093146 1821 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Prpf39-201ENSMUST00000120580 4069 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Prnd-204ENSMUST00000110172 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm22659-201ENSMUST00000104195 130 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm12353-201ENSMUST00000108250 554 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm11585-201ENSMUST00000120901 569 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm14369-201ENSMUST00000121355 285 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Myl12a-202ENSMUST00000123686 804 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm22667-201ENSMUST00000158718 328 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm7609-203ENSMUST00000160058 1142 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm3355-201ENSMUST00000160079 487 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm17043-201ENSMUST00000164621 1283 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Mirg-204ENSMUST00000182185 3822 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm26914-201ENSMUST00000182262 223 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm29576-201ENSMUST00000188020 678 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm29388-201ENSMUST00000190718 284 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm28354-201ENSMUST00000190904 678 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm37376-201ENSMUST00000192176 453 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm43957-201ENSMUST00000203606 362 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm29803-201ENSMUST00000205069 375 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm5737-201ENSMUST00000208668 1272 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm18942-201ENSMUST00000213578 1121 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm3473-201ENSMUST00000216911 1096 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 AC134913.1-201ENSMUST00000224563 504 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Diaph3-206ENSMUST00000226745 713 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Vmn1r191-201ENSMUST00000072369 897 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Mir195a-201ENSMUST00000083477 94 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Olfr1425-201ENSMUST00000087828 939 ntBASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Cib3-201ENSMUST00000098630 585 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm10513-201ENSMUST00000194203 6468 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms