Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm15464-201ENSMUST00000118718 431 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm11763-201ENSMUST00000119964 312 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm15224-201ENSMUST00000120501 388 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm6044-201ENSMUST00000121819 499 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm16008-201ENSMUST00000126009 810 ntTSL 3 BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm12708-202ENSMUST00000136941 1046 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm11454-201ENSMUST00000144092 714 ntTSL 3 BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm16235-201ENSMUST00000146132 342 ntTSL 5 BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm8893-201ENSMUST00000172146 1242 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Atpaf1-202ENSMUST00000175725 996 ntTSL 5 BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm7678-201ENSMUST00000181879 943 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm17800-201ENSMUST00000182466 971 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Mir6239-201ENSMUST00000183564 105 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Mir7115-201ENSMUST00000184275 64 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm9120-201ENSMUST00000190835 994 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm7270-202ENSMUST00000195850 1131 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 AC134917.3-201ENSMUST00000222057 1283 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 AC091683.2-201ENSMUST00000222996 1185 ntTSL 3 BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm10054-201ENSMUST00000223362 431 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm18639-201ENSMUST00000210442 1769 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Rnf141-204ENSMUST00000175981 2333 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Selenop-201ENSMUST00000082424 2013 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm17076-201ENSMUST00000165185 1401 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Itgb1bp2-201ENSMUST00000033674 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm5721-201ENSMUST00000119845 1696 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm25594-201ENSMUST00000102274 82 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm12312-201ENSMUST00000120351 644 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm13633-201ENSMUST00000120668 898 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm14813-201ENSMUST00000122291 395 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm12989-201ENSMUST00000122331 731 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 D630023F18Rik-202ENSMUST00000148020 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm23822-201ENSMUST00000158739 128 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm17139-201ENSMUST00000163802 571 ntTSL 5 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm26736-201ENSMUST00000180425 1236 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 1700022H16Rik-201ENSMUST00000188935 476 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm29175-201ENSMUST00000189500 402 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Ighv8-16-201ENSMUST00000199258 294 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm32916-201ENSMUST00000207884 935 ntTSL 5 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm35177-201ENSMUST00000216525 623 ntTSL 3 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 AC167013.6-201ENSMUST00000226587 1067 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 AC139758.2-201ENSMUST00000228380 529 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm5590-201ENSMUST00000059110 345 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Tas2r138-201ENSMUST00000076565 996 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm37150-201ENSMUST00000193900 2754 ntBASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gpr1-201ENSMUST00000050536 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Cd36-206ENSMUST00000197890 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Tnip3-207ENSMUST00000212375 1543 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Ugt2b36-201ENSMUST00000094649 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup88Q8CEC0 Gm14273-201ENSMUST00000136315 1786 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Retreg1-203ENSMUST00000226438 2783 ntBASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Mitf-203ENSMUST00000101123 2144 ntTSL 5 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Mitf-204ENSMUST00000113339 2144 ntTSL 5 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Fas-201ENSMUST00000025691 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Ucn3-201ENSMUST00000058610 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm9050-201ENSMUST00000119501 448 ntBASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm15694-201ENSMUST00000121984 283 ntBASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms