Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm8310-201ENSMUST00000117526 1193 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm12376-201ENSMUST00000120538 607 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm11945-201ENSMUST00000120551 476 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 n-R5s30-201ENSMUST00000122624 122 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Alg13-203ENSMUST00000123710 604 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm15050-201ENSMUST00000133723 552 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm16305-201ENSMUST00000140747 556 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Coq8a-208ENSMUST00000160879 561 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm17147-201ENSMUST00000164176 432 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm4462-201ENSMUST00000166453 492 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm25687-201ENSMUST00000175442 241 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Plscr5-201ENSMUST00000179751 1191 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm8984-201ENSMUST00000183005 1019 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm27350-201ENSMUST00000185109 98 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm28274-202ENSMUST00000187775 1157 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm28202-203ENSMUST00000189780 1157 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm37727-201ENSMUST00000191637 819 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm32460-201ENSMUST00000195647 232 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Ucma-205ENSMUST00000195688 554 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Mir1892-201ENSMUST00000197752 80 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Ngf-204ENSMUST00000198644 1120 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm43110-201ENSMUST00000198877 226 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm18689-201ENSMUST00000203969 902 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Psenen-202ENSMUST00000207031 316 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm18124-201ENSMUST00000210695 706 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 AC165159.1-201ENSMUST00000223825 631 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 AC154806.1-203ENSMUST00000227370 1032 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 AC122459.4-201ENSMUST00000228654 551 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 S100a10-201ENSMUST00000045756 685 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Lkaaear1-201ENSMUST00000052416 718 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Rnase11-201ENSMUST00000076106 713 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Vmn1r209-201ENSMUST00000095961 939 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Ugt1a6b-202ENSMUST00000113138 2303 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Pgm2-202ENSMUST00000102783 2523 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Hsp90ab1-201ENSMUST00000024739 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Sin3a-207ENSMUST00000168502 4899 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm9583-201ENSMUST00000219613 1843 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Dsg3-201ENSMUST00000070892 4108 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Vmn2r54-201ENSMUST00000086210 2421 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm12834-201ENSMUST00000121855 2829 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Olfr70-201ENSMUST00000055545 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Nek10-203ENSMUST00000112631 3386 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Ccdc146-201ENSMUST00000030552 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm17382-201ENSMUST00000108741 1514 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Slc7a13-201ENSMUST00000035890 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Jade1-206ENSMUST00000191952 3327 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gdnf-201ENSMUST00000022744 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 AC132392.1-202ENSMUST00000216652 2681 ntAPPRIS P5 TSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Hacl1-202ENSMUST00000127204 1699 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm42966-201ENSMUST00000197883 1691 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm13192-201ENSMUST00000101199 208 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Eif5a-204ENSMUST00000108607 852 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Fam220-ps-201ENSMUST00000116535 783 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm10443-201ENSMUST00000119024 210 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm14463-201ENSMUST00000121117 498 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm16058-201ENSMUST00000124392 427 ntTSL 2 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm15104-201ENSMUST00000132626 842 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm25154-201ENSMUST00000157123 119 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Tead1-210ENSMUST00000168981 1185 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm8857-201ENSMUST00000170064 1102 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Ang-202ENSMUST00000171688 728 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm26379-201ENSMUST00000178125 138 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm8957-201ENSMUST00000182082 1012 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm26937-201ENSMUST00000182628 1008 ntBASIC8.35□□□□□ -1.07
Trim39Q9ESN2 Gm18254-201ENSMUST00000185699 1204 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms