Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm45821-201ENSMUST00000211967 1757 ntTSL 5 BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gm14188-201ENSMUST00000105060 168 ntBASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gm5915-201ENSMUST00000116136 454 ntBASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gm378-201ENSMUST00000120797 820 ntBASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gm13645-201ENSMUST00000145163 699 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gm3654-201ENSMUST00000173038 909 ntBASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gm6931-202ENSMUST00000183137 1009 ntBASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Ms4a3-202ENSMUST00000186023 966 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gabra4-203ENSMUST00000198138 440 ntTSL 2 BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gm42964-201ENSMUST00000202965 382 ntBASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gm32089-201ENSMUST00000221222 1193 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 AC163038.1-201ENSMUST00000223632 1142 ntBASIC9.86□□□□□ -0.83
Nup88Q8CEC0 C9-201ENSMUST00000022749 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Camk2a-201ENSMUST00000025519 3244 ntTSL 5 BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gm5560-201ENSMUST00000086918 892 ntBASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 H2-M10.5-201ENSMUST00000041531 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 AU021092-201ENSMUST00000050160 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Pkd2l2-201ENSMUST00000014647 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Slc31a1-201ENSMUST00000084526 3718 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Olfr444-202ENSMUST00000204092 1472 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Naa20-204ENSMUST00000134759 1883 ntTSL 2 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Ephx2-202ENSMUST00000224698 1985 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Spred1-202ENSMUST00000110901 1440 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 AC123832.1-201ENSMUST00000214120 2371 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Msr1-201ENSMUST00000026021 1424 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gimap8-201ENSMUST00000078223 3160 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm43080-201ENSMUST00000199006 2643 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Prc1-210ENSMUST00000174172 3008 ntTSL 5 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm12385-201ENSMUST00000117439 795 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm13198-201ENSMUST00000119322 826 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm11953-201ENSMUST00000122352 1003 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm15833-201ENSMUST00000161563 957 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm17053-201ENSMUST00000163501 495 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Mir3060-201ENSMUST00000175339 83 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm9476-201ENSMUST00000179109 696 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm27034-201ENSMUST00000182552 940 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Pisrt1-201ENSMUST00000195532 515 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm42441-201ENSMUST00000199778 748 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm45554-201ENSMUST00000210731 1004 ntTSL 5 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm26633-201ENSMUST00000180546 3256 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm42519-201ENSMUST00000199282 3656 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Cep112-206ENSMUST00000130515 3395 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm9776-201ENSMUST00000059598 2980 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm42759-201ENSMUST00000195915 2439 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm43621-201ENSMUST00000202733 2022 ntBASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm10538-201ENSMUST00000189499 1877 ntTSL 2 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup88Q8CEC0 Gm43609-201ENSMUST00000199084 2712 ntBASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm42692-201ENSMUST00000199482 2833 ntBASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 H2-M10.6-201ENSMUST00000041398 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 A530040E14Rik-201ENSMUST00000093501 1515 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Zfp750-201ENSMUST00000092298 3232 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm22150-201ENSMUST00000104447 135 ntBASIC9.84□□□□□ -0.83
Nup88Q8CEC0 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm11999-201ENSMUST00000145789 813 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 4930562A09Rik-201ENSMUST00000153818 734 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Vmn2r-ps87-201ENSMUST00000174393 876 ntBASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm6919-201ENSMUST00000180049 483 ntBASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms