Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm6721-201ENSMUST00000218353 1445 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Rnf214-209ENSMUST00000161203 3294 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Kcns3-203ENSMUST00000217974 2314 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 AC169038.1-201ENSMUST00000227378 1352 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Lypd6b-201ENSMUST00000028103 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm12079-201ENSMUST00000112483 244 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gng12-207ENSMUST00000114228 748 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm14427-201ENSMUST00000117183 635 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm12387-201ENSMUST00000118573 955 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm14466-201ENSMUST00000119028 451 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Rpl9-ps3-201ENSMUST00000119147 576 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm5761-201ENSMUST00000119238 834 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Rpl15-ps4-201ENSMUST00000122372 606 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm25179-201ENSMUST00000122632 128 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm13855-201ENSMUST00000145644 744 ntTSL 2 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 4933428C19Rik-201ENSMUST00000146043 818 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm13832-201ENSMUST00000146546 414 ntTSL 2 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm25426-201ENSMUST00000157606 170 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 6330549D23Rik-202ENSMUST00000159536 1102 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm16563-201ENSMUST00000162673 423 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Pdzk1ip1-207ENSMUST00000171877 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm44574-201ENSMUST00000172729 390 ntTSL 2 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm20717-201ENSMUST00000176762 657 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Pdzk1ip1-208ENSMUST00000177647 826 ntAPPRIS P3 TSL 3 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm21818-201ENSMUST00000178828 513 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Car1-203ENSMUST00000181860 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm8756-201ENSMUST00000183250 929 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm27195-201ENSMUST00000184283 681 ntTSL 2 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm28167-201ENSMUST00000187644 550 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Itpa-ps2-201ENSMUST00000188629 589 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm2328-201ENSMUST00000193525 535 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 BC002189-201ENSMUST00000195674 598 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm37113-201ENSMUST00000195675 1157 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm8992-201ENSMUST00000204463 502 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm44576-201ENSMUST00000208876 411 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 AC159244.2-201ENSMUST00000222051 220 ntTSL 3 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 AC167192.1-201ENSMUST00000225908 139 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm28653-202ENSMUST00000227082 521 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Dnajc5b-201ENSMUST00000029132 923 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Apoc1-201ENSMUST00000045035 432 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 n-R5s5-201ENSMUST00000083134 119 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Ppil4-201ENSMUST00000015901 3471 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Ap3m1-201ENSMUST00000022371 1770 ntTSL 5 BASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Acsl6-206ENSMUST00000101211 3106 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Trim39Q9ESN2 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Arsg-201ENSMUST00000020928 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 AC153566.1-201ENSMUST00000216441 2057 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm14504-201ENSMUST00000119391 1497 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm38195-201ENSMUST00000194247 1499 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 AC100729.1-201ENSMUST00000225458 1454 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 A930037H05Rik-203ENSMUST00000207446 4320 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm27013-202ENSMUST00000205067 1436 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Afap1l2-202ENSMUST00000118800 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Zmynd11-202ENSMUST00000110633 1857 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm37262-201ENSMUST00000192816 1818 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Egflam-202ENSMUST00000096494 4391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm24556-201ENSMUST00000104547 130 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Rhox12-202ENSMUST00000115146 561 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Foxp3-204ENSMUST00000115740 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm15325-201ENSMUST00000149661 697 ntTSL 2 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm12493-201ENSMUST00000150111 441 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm23441-201ENSMUST00000157268 127 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm23780-201ENSMUST00000157937 275 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm24532-201ENSMUST00000157951 286 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Mir3091-201ENSMUST00000175086 76 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm9825-201ENSMUST00000178598 843 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms