Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Cldn6Q9Z262 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn6Q9Z262 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Gm38205-201ENSMUST00000192243 258 ntBASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn6Q9Z262 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldn6Q9Z262 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cldn6Q9Z262 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn6Q9Z262 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn6Q9Z262 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.66■□□□□ 0.42
Cldn6Q9Z262 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn6Q9Z262 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.66■□□□□ 0.42
Cldn6Q9Z262 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.66■□□□□ 0.42
Cldn6Q9Z262 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cldn6Q9Z262 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn6Q9Z262 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn6Q9Z262 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn6Q9Z262 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.66■□□□□ 0.42
Cldn6Q9Z262 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn6Q9Z262 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms