Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1h3Q9Z0Y9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1h3Q9Z0Y9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1h3Q9Z0Y9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1h3Q9Z0Y9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nr1h3Q9Z0Y9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nr1h3Q9Z0Y9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1h3Q9Z0Y9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1h3Q9Z0Y9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.51■□□□□ 0.87
Nr1h3Q9Z0Y9 Gm20049-201ENSMUST00000219950 730 ntBASIC20.51■□□□□ 0.87
Nr1h3Q9Z0Y9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1h3Q9Z0Y9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nr1h3Q9Z0Y9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1h3Q9Z0Y9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1h3Q9Z0Y9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr1h3Q9Z0Y9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr1h3Q9Z0Y9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr1h3Q9Z0Y9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nr1h3Q9Z0Y9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr1h3Q9Z0Y9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr1h3Q9Z0Y9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr1h3Q9Z0Y9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.48■□□□□ 0.87
Nr1h3Q9Z0Y9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nr1h3Q9Z0Y9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr1h3Q9Z0Y9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr1h3Q9Z0Y9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nr1h3Q9Z0Y9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nr1h3Q9Z0Y9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr1h3Q9Z0Y9 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.47■□□□□ 0.87
Nr1h3Q9Z0Y9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr1h3Q9Z0Y9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr1h3Q9Z0Y9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr1h3Q9Z0Y9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr1h3Q9Z0Y9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nr1h3Q9Z0Y9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nr1h3Q9Z0Y9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr1h3Q9Z0Y9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr1h3Q9Z0Y9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr1h3Q9Z0Y9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.46■□□□□ 0.87
Nr1h3Q9Z0Y9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.46■□□□□ 0.87
Nr1h3Q9Z0Y9 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.46■□□□□ 0.87
Nr1h3Q9Z0Y9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr1h3Q9Z0Y9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr1h3Q9Z0Y9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr1h3Q9Z0Y9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h3Q9Z0Y9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h3Q9Z0Y9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h3Q9Z0Y9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.45■□□□□ 0.86
Nr1h3Q9Z0Y9 Gm13168-201ENSMUST00000121771 632 ntBASIC20.45■□□□□ 0.86
Nr1h3Q9Z0Y9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nr1h3Q9Z0Y9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.45■□□□□ 0.86
Nr1h3Q9Z0Y9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h3Q9Z0Y9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h3Q9Z0Y9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h3Q9Z0Y9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h3Q9Z0Y9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h3Q9Z0Y9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h3Q9Z0Y9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms