Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col13a1Q9R1N9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col13a1Q9R1N9 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.02■□□□□ 0.16
Col13a1Q9R1N9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col13a1Q9R1N9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.02■□□□□ 0.16
Col13a1Q9R1N9 Gm15565-201ENSMUST00000118890 427 ntBASIC16.02■□□□□ 0.16
Col13a1Q9R1N9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Col13a1Q9R1N9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col13a1Q9R1N9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col13a1Q9R1N9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.02■□□□□ 0.16
Col13a1Q9R1N9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col13a1Q9R1N9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col13a1Q9R1N9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col13a1Q9R1N9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col13a1Q9R1N9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col13a1Q9R1N9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Gm715-201ENSMUST00000117865 831 ntBASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.01■□□□□ 0.15
Col13a1Q9R1N9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16■□□□□ 0.15
Col13a1Q9R1N9 CT030146.1-201ENSMUST00000220919 217 ntBASIC16■□□□□ 0.15
Col13a1Q9R1N9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Col13a1Q9R1N9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col13a1Q9R1N9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.99■□□□□ 0.15
Col13a1Q9R1N9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 Gm12896-201ENSMUST00000118430 226 ntBASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col13a1Q9R1N9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 Gm5643-201ENSMUST00000117081 966 ntBASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 Rab3c-203ENSMUST00000224180 967 ntBASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col13a1Q9R1N9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms