Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Gm21956-201ENSMUST00000179946 522 ntBASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms