Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rfwd2Q9R1A8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd2Q9R1A8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd2Q9R1A8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd2Q9R1A8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd2Q9R1A8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rfwd2Q9R1A8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Gm21956-201ENSMUST00000179946 522 ntBASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd2Q9R1A8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms