Protein–RNA interactions for Protein: Q9R194

Cry2, Cryptochrome-2, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cry2Q9R194 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cry2Q9R194 Gm15565-201ENSMUST00000118890 427 ntBASIC21.74■■□□□ 1.07
Cry2Q9R194 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cry2Q9R194 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cry2Q9R194 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cry2Q9R194 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cry2Q9R194 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.73■■□□□ 1.07
Cry2Q9R194 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cry2Q9R194 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cry2Q9R194 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cry2Q9R194 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cry2Q9R194 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cry2Q9R194 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.73■■□□□ 1.07
Cry2Q9R194 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.73■■□□□ 1.07
Cry2Q9R194 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.73■■□□□ 1.07
Cry2Q9R194 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.73■■□□□ 1.07
Cry2Q9R194 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cry2Q9R194 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cry2Q9R194 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cry2Q9R194 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.73■■□□□ 1.07
Cry2Q9R194 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cry2Q9R194 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.72■■□□□ 1.07
Cry2Q9R194 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cry2Q9R194 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.72■■□□□ 1.07
Cry2Q9R194 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Cry2Q9R194 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cry2Q9R194 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cry2Q9R194 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cry2Q9R194 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.72■■□□□ 1.07
Cry2Q9R194 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cry2Q9R194 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cry2Q9R194 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cry2Q9R194 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cry2Q9R194 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.71■■□□□ 1.07
Cry2Q9R194 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cry2Q9R194 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cry2Q9R194 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.71■■□□□ 1.07
Cry2Q9R194 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cry2Q9R194 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cry2Q9R194 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cry2Q9R194 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cry2Q9R194 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cry2Q9R194 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cry2Q9R194 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cry2Q9R194 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cry2Q9R194 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cry2Q9R194 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.7■■□□□ 1.06
Cry2Q9R194 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cry2Q9R194 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.7■■□□□ 1.06
Cry2Q9R194 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.7■■□□□ 1.06
Cry2Q9R194 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Cry2Q9R194 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cry2Q9R194 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cry2Q9R194 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Cry2Q9R194 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Cry2Q9R194 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cry2Q9R194 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cry2Q9R194 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cry2Q9R194 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cry2Q9R194 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.68■■□□□ 1.06
Cry2Q9R194 Gm11643-201ENSMUST00000119578 864 ntBASIC21.68■■□□□ 1.06
Cry2Q9R194 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.68■■□□□ 1.06
Cry2Q9R194 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Cry2Q9R194 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cry2Q9R194 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cry2Q9R194 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.68■■□□□ 1.06
Cry2Q9R194 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Cry2Q9R194 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cry2Q9R194 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cry2Q9R194 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cry2Q9R194 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Cry2Q9R194 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Cry2Q9R194 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cry2Q9R194 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cry2Q9R194 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cry2Q9R194 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cry2Q9R194 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cry2Q9R194 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cry2Q9R194 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cry2Q9R194 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Cry2Q9R194 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cry2Q9R194 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Cry2Q9R194 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cry2Q9R194 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cry2Q9R194 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cry2Q9R194 Gm11927-201ENSMUST00000118472 759 ntBASIC21.66■■□□□ 1.06
Cry2Q9R194 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cry2Q9R194 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Cry2Q9R194 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cry2Q9R194 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.66■■□□□ 1.06
Cry2Q9R194 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cry2Q9R194 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cry2Q9R194 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cry2Q9R194 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Cry2Q9R194 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cry2Q9R194 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cry2Q9R194 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cry2Q9R194 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cry2Q9R194 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cry2Q9R194 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms