Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Gm18666-201ENSMUST00000190039 958 ntBASIC16.42■□□□□ 0.22
Nubp1Q9R060 Gm2559-201ENSMUST00000201323 363 ntBASIC16.42■□□□□ 0.22
Nubp1Q9R060 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.42■□□□□ 0.22
Nubp1Q9R060 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.42■□□□□ 0.22
Nubp1Q9R060 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Gm12896-201ENSMUST00000118430 226 ntBASIC16.41■□□□□ 0.22
Nubp1Q9R060 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nubp1Q9R060 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.4■□□□□ 0.22
Nubp1Q9R060 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.4■□□□□ 0.22
Nubp1Q9R060 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nubp1Q9R060 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.4■□□□□ 0.22
Nubp1Q9R060 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Nubp1Q9R060 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nubp1Q9R060 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nubp1Q9R060 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nubp1Q9R060 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nubp1Q9R060 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nubp1Q9R060 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nubp1Q9R060 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nubp1Q9R060 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nubp1Q9R060 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.39■□□□□ 0.21
Nubp1Q9R060 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nubp1Q9R060 Gm27275-201ENSMUST00000184318 272 ntBASIC16.39■□□□□ 0.21
Nubp1Q9R060 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC16.39■□□□□ 0.21
Nubp1Q9R060 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.39■□□□□ 0.21
Nubp1Q9R060 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nubp1Q9R060 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Nubp1Q9R060 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nubp1Q9R060 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.38■□□□□ 0.21
Nubp1Q9R060 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nubp1Q9R060 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.38■□□□□ 0.21
Nubp1Q9R060 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nubp1Q9R060 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nubp1Q9R060 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nubp1Q9R060 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Nubp1Q9R060 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nubp1Q9R060 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nubp1Q9R060 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nubp1Q9R060 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nubp1Q9R060 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nubp1Q9R060 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.36■□□□□ 0.21
Nubp1Q9R060 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.36■□□□□ 0.21
Nubp1Q9R060 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nubp1Q9R060 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nubp1Q9R060 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.36■□□□□ 0.21
Nubp1Q9R060 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nubp1Q9R060 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nubp1Q9R060 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms