Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Scn11aQ9R053 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Scn11aQ9R053 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Scn11aQ9R053 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.72■■□□□ 1.23
Scn11aQ9R053 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Scn11aQ9R053 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Scn11aQ9R053 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Scn11aQ9R053 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
Scn11aQ9R053 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scn11aQ9R053 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scn11aQ9R053 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scn11aQ9R053 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
Scn11aQ9R053 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scn11aQ9R053 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scn11aQ9R053 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Scn11aQ9R053 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.71■■□□□ 1.23
Scn11aQ9R053 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scn11aQ9R053 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scn11aQ9R053 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scn11aQ9R053 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Scn11aQ9R053 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scn11aQ9R053 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.7■■□□□ 1.22
Scn11aQ9R053 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scn11aQ9R053 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC22.7■■□□□ 1.22
Scn11aQ9R053 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scn11aQ9R053 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scn11aQ9R053 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scn11aQ9R053 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scn11aQ9R053 Gm21596-201ENSMUST00000178049 1316 ntBASIC22.69■■□□□ 1.22
Scn11aQ9R053 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scn11aQ9R053 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.69■■□□□ 1.22
Scn11aQ9R053 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Scn11aQ9R053 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Scn11aQ9R053 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scn11aQ9R053 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scn11aQ9R053 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.68■■□□□ 1.22
Scn11aQ9R053 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Scn11aQ9R053 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scn11aQ9R053 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Scn11aQ9R053 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scn11aQ9R053 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scn11aQ9R053 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Scn11aQ9R053 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Scn11aQ9R053 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn11aQ9R053 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn11aQ9R053 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn11aQ9R053 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Scn11aQ9R053 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Scn11aQ9R053 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
Scn11aQ9R053 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.67■■□□□ 1.22
Scn11aQ9R053 AC140264.2-202ENSMUST00000218746 817 ntBASIC22.67■■□□□ 1.22
Scn11aQ9R053 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn11aQ9R053 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Scn11aQ9R053 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn11aQ9R053 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Scn11aQ9R053 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Scn11aQ9R053 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scn11aQ9R053 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Scn11aQ9R053 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Scn11aQ9R053 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.66■■□□□ 1.22
Scn11aQ9R053 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scn11aQ9R053 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Scn11aQ9R053 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scn11aQ9R053 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scn11aQ9R053 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn11aQ9R053 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.65■■□□□ 1.22
Scn11aQ9R053 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Scn11aQ9R053 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.65■■□□□ 1.22
Scn11aQ9R053 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn11aQ9R053 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scn11aQ9R053 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Scn11aQ9R053 Dio3-201ENSMUST00000097228 1449 ntBASIC22.64■■□□□ 1.22
Scn11aQ9R053 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC22.64■■□□□ 1.22
Scn11aQ9R053 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scn11aQ9R053 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scn11aQ9R053 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Scn11aQ9R053 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Scn11aQ9R053 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scn11aQ9R053 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scn11aQ9R053 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scn11aQ9R053 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scn11aQ9R053 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scn11aQ9R053 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scn11aQ9R053 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn11aQ9R053 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Scn11aQ9R053 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Scn11aQ9R053 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Scn11aQ9R053 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn11aQ9R053 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Scn11aQ9R053 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scn11aQ9R053 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn11aQ9R053 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn11aQ9R053 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.61■■□□□ 1.21
Scn11aQ9R053 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn11aQ9R053 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn11aQ9R053 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Scn11aQ9R053 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn11aQ9R053 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scn11aQ9R053 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Scn11aQ9R053 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms