Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 Gm27011-201ENSMUST00000182352 972 ntBASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 Gm6365-201ENSMUST00000054711 744 ntBASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
Tlr4Q9QUK6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tlr4Q9QUK6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Tlr4Q9QUK6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr4Q9QUK6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Tlr4Q9QUK6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr4Q9QUK6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr4Q9QUK6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr4Q9QUK6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Tlr4Q9QUK6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.51■□□□□ 0.55
Tlr4Q9QUK6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Tlr4Q9QUK6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr4Q9QUK6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr4Q9QUK6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Gm7290-201ENSMUST00000104990 617 ntBASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Gm12918-201ENSMUST00000120234 636 ntBASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Gm15710-201ENSMUST00000121821 636 ntBASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Gm5075-201ENSMUST00000196916 622 ntBASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tlr4Q9QUK6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr4Q9QUK6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr4Q9QUK6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr4Q9QUK6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Tlr4Q9QUK6 Gm13148-201ENSMUST00000118892 745 ntBASIC18.48■□□□□ 0.55
Tlr4Q9QUK6 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.48■□□□□ 0.55
Tlr4Q9QUK6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr4Q9QUK6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr4Q9QUK6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr4Q9QUK6 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.48■□□□□ 0.55
Tlr4Q9QUK6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tlr4Q9QUK6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr4Q9QUK6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr4Q9QUK6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr4Q9QUK6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.47■□□□□ 0.55
Tlr4Q9QUK6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr4Q9QUK6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr4Q9QUK6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.47■□□□□ 0.55
Tlr4Q9QUK6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr4Q9QUK6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tlr4Q9QUK6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr4Q9QUK6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr4Q9QUK6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr4Q9QUK6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tlr4Q9QUK6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr4Q9QUK6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr4Q9QUK6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr4Q9QUK6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr4Q9QUK6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr4Q9QUK6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr4Q9QUK6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Tlr4Q9QUK6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr4Q9QUK6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.46■□□□□ 0.54
Tlr4Q9QUK6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr4Q9QUK6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tlr4Q9QUK6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr4Q9QUK6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr4Q9QUK6 Gm12441-201ENSMUST00000121806 588 ntBASIC18.45■□□□□ 0.54
Tlr4Q9QUK6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr4Q9QUK6 Gm4968-201ENSMUST00000071458 858 ntBASIC18.45■□□□□ 0.54
Tlr4Q9QUK6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr4Q9QUK6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr4Q9QUK6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tlr4Q9QUK6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms