Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tdp2Q9JJX7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tdp2Q9JJX7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Gm18284-201ENSMUST00000172604 624 ntBASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tdp2Q9JJX7 Rarb-207ENSMUST00000225921 2756 ntBASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tdp2Q9JJX7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tdp2Q9JJX7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.59■□□□□ 0.57
Tdp2Q9JJX7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Tdp2Q9JJX7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tdp2Q9JJX7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tdp2Q9JJX7 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.59■□□□□ 0.57
Tdp2Q9JJX7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tdp2Q9JJX7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tdp2Q9JJX7 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.58■□□□□ 0.57
Tdp2Q9JJX7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Tdp2Q9JJX7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tdp2Q9JJX7 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.58■□□□□ 0.57
Tdp2Q9JJX7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tdp2Q9JJX7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tdp2Q9JJX7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Tdp2Q9JJX7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms