Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Zc3h8Q9JJ48 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Zc3h8Q9JJ48 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Zc3h8Q9JJ48 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Zc3h8Q9JJ48 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Gm29257-201ENSMUST00000186115 639 ntBASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zc3h8Q9JJ48 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Golph3-202ENSMUST00000226517 2359 ntBASIC17.5■□□□□ 0.39
Zc3h8Q9JJ48 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h8Q9JJ48 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h8Q9JJ48 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h8Q9JJ48 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h8Q9JJ48 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Zc3h8Q9JJ48 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.48■□□□□ 0.39
Zc3h8Q9JJ48 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h8Q9JJ48 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.48■□□□□ 0.39
Zc3h8Q9JJ48 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h8Q9JJ48 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h8Q9JJ48 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.47■□□□□ 0.39
Zc3h8Q9JJ48 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Gm7290-201ENSMUST00000104990 617 ntBASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Gm12918-201ENSMUST00000120234 636 ntBASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Gm15710-201ENSMUST00000121821 636 ntBASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Mir5133-201ENSMUST00000174955 77 ntBASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Gm5075-201ENSMUST00000196916 622 ntBASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms