Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tubb3Q9ERD7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubb3Q9ERD7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubb3Q9ERD7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubb3Q9ERD7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tubb3Q9ERD7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.77■□□□□ 0.6
Tubb3Q9ERD7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Tubb3Q9ERD7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tubb3Q9ERD7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tubb3Q9ERD7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tubb3Q9ERD7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tubb3Q9ERD7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubb3Q9ERD7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tubb3Q9ERD7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tubb3Q9ERD7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tubb3Q9ERD7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tubb3Q9ERD7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Tubb3Q9ERD7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.73■□□□□ 0.59
Tubb3Q9ERD7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.73■□□□□ 0.59
Tubb3Q9ERD7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tubb3Q9ERD7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tubb3Q9ERD7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.73■□□□□ 0.59
Tubb3Q9ERD7 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.73■□□□□ 0.59
Tubb3Q9ERD7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tubb3Q9ERD7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tubb3Q9ERD7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tubb3Q9ERD7 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.72■□□□□ 0.59
Tubb3Q9ERD7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tubb3Q9ERD7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tubb3Q9ERD7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tubb3Q9ERD7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tubb3Q9ERD7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.72■□□□□ 0.59
Tubb3Q9ERD7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tubb3Q9ERD7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tubb3Q9ERD7 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.72■□□□□ 0.59
Tubb3Q9ERD7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tubb3Q9ERD7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tubb3Q9ERD7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tubb3Q9ERD7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tubb3Q9ERD7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tubb3Q9ERD7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tubb3Q9ERD7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.7■□□□□ 0.58
Tubb3Q9ERD7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms