Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.66■□□□□ 0.42
Rtp4Q9ER80 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp4Q9ER80 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Rtp4Q9ER80 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp4Q9ER80 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp4Q9ER80 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp4Q9ER80 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.65■□□□□ 0.42
Rtp4Q9ER80 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp4Q9ER80 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp4Q9ER80 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp4Q9ER80 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rtp4Q9ER80 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp4Q9ER80 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.65■□□□□ 0.42
Rtp4Q9ER80 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rtp4Q9ER80 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtp4Q9ER80 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtp4Q9ER80 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtp4Q9ER80 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtp4Q9ER80 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtp4Q9ER80 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.64■□□□□ 0.41
Rtp4Q9ER80 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtp4Q9ER80 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rtp4Q9ER80 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtp4Q9ER80 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rtp4Q9ER80 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtp4Q9ER80 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtp4Q9ER80 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.63■□□□□ 0.41
Rtp4Q9ER80 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.63■□□□□ 0.41
Rtp4Q9ER80 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rtp4Q9ER80 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtp4Q9ER80 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rtp4Q9ER80 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtp4Q9ER80 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rtp4Q9ER80 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtp4Q9ER80 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtp4Q9ER80 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.62■□□□□ 0.41
Rtp4Q9ER80 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtp4Q9ER80 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtp4Q9ER80 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtp4Q9ER80 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtp4Q9ER80 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rtp4Q9ER80 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtp4Q9ER80 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtp4Q9ER80 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp4Q9ER80 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rtp4Q9ER80 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp4Q9ER80 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rtp4Q9ER80 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp4Q9ER80 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rtp4Q9ER80 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Rtp4Q9ER80 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.61■□□□□ 0.41
Rtp4Q9ER80 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.61■□□□□ 0.41
Rtp4Q9ER80 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp4Q9ER80 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp4Q9ER80 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.61■□□□□ 0.41
Rtp4Q9ER80 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp4Q9ER80 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp4Q9ER80 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp4Q9ER80 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp4Q9ER80 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp4Q9ER80 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp4Q9ER80 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp4Q9ER80 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.59■□□□□ 0.41
Rtp4Q9ER80 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.59■□□□□ 0.41
Rtp4Q9ER80 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.59■□□□□ 0.41
Rtp4Q9ER80 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp4Q9ER80 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp4Q9ER80 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp4Q9ER80 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms