Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssmem1Q9D9Y8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssmem1Q9D9Y8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ssmem1Q9D9Y8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ssmem1Q9D9Y8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ssmem1Q9D9Y8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssmem1Q9D9Y8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ssmem1Q9D9Y8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssmem1Q9D9Y8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssmem1Q9D9Y8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ssmem1Q9D9Y8 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.28■□□□□ 0.2
Ssmem1Q9D9Y8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssmem1Q9D9Y8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssmem1Q9D9Y8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ssmem1Q9D9Y8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ssmem1Q9D9Y8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssmem1Q9D9Y8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.27■□□□□ 0.2
Ssmem1Q9D9Y8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ssmem1Q9D9Y8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssmem1Q9D9Y8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssmem1Q9D9Y8 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.27■□□□□ 0.19
Ssmem1Q9D9Y8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssmem1Q9D9Y8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssmem1Q9D9Y8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.26■□□□□ 0.19
Ssmem1Q9D9Y8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssmem1Q9D9Y8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssmem1Q9D9Y8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssmem1Q9D9Y8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssmem1Q9D9Y8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssmem1Q9D9Y8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssmem1Q9D9Y8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ssmem1Q9D9Y8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssmem1Q9D9Y8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.25■□□□□ 0.19
Ssmem1Q9D9Y8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ssmem1Q9D9Y8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ssmem1Q9D9Y8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.24■□□□□ 0.19
Ssmem1Q9D9Y8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ssmem1Q9D9Y8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ssmem1Q9D9Y8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ssmem1Q9D9Y8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ssmem1Q9D9Y8 Gm6420-201ENSMUST00000193885 723 ntBASIC16.24■□□□□ 0.19
Ssmem1Q9D9Y8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.24■□□□□ 0.19
Ssmem1Q9D9Y8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ssmem1Q9D9Y8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ssmem1Q9D9Y8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ssmem1Q9D9Y8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ssmem1Q9D9Y8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Gm12933-201ENSMUST00000120203 872 ntBASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms