Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ShpkQ9D5J6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ShpkQ9D5J6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShpkQ9D5J6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
ShpkQ9D5J6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShpkQ9D5J6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.83■□□□□ 0.12
ShpkQ9D5J6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShpkQ9D5J6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.83■□□□□ 0.12
ShpkQ9D5J6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShpkQ9D5J6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShpkQ9D5J6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShpkQ9D5J6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ShpkQ9D5J6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShpkQ9D5J6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShpkQ9D5J6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ShpkQ9D5J6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShpkQ9D5J6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ShpkQ9D5J6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ShpkQ9D5J6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShpkQ9D5J6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShpkQ9D5J6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShpkQ9D5J6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShpkQ9D5J6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShpkQ9D5J6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.81■□□□□ 0.12
ShpkQ9D5J6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShpkQ9D5J6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShpkQ9D5J6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShpkQ9D5J6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ShpkQ9D5J6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShpkQ9D5J6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShpkQ9D5J6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShpkQ9D5J6 AA386476-201ENSMUST00000098781 1665 ntBASIC15.79■□□□□ 0.12
ShpkQ9D5J6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ShpkQ9D5J6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShpkQ9D5J6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShpkQ9D5J6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShpkQ9D5J6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShpkQ9D5J6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ShpkQ9D5J6 Gm7143-201ENSMUST00000222811 859 ntBASIC15.79■□□□□ 0.12
ShpkQ9D5J6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShpkQ9D5J6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShpkQ9D5J6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ShpkQ9D5J6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.77■□□□□ 0.12
ShpkQ9D5J6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ShpkQ9D5J6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ShpkQ9D5J6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ShpkQ9D5J6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ShpkQ9D5J6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.77■□□□□ 0.12
ShpkQ9D5J6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.77■□□□□ 0.12
ShpkQ9D5J6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
ShpkQ9D5J6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ShpkQ9D5J6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ShpkQ9D5J6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ShpkQ9D5J6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ShpkQ9D5J6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
ShpkQ9D5J6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ShpkQ9D5J6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
ShpkQ9D5J6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
ShpkQ9D5J6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.76■□□□□ 0.11
ShpkQ9D5J6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.76■□□□□ 0.11
ShpkQ9D5J6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ShpkQ9D5J6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ShpkQ9D5J6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ShpkQ9D5J6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ShpkQ9D5J6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ShpkQ9D5J6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ShpkQ9D5J6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ShpkQ9D5J6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ShpkQ9D5J6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms