Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CYI0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Q9CYI0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CYI0 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.88■□□□□ 0.93
Q9CYI0 Gm4968-201ENSMUST00000071458 858 ntBASIC20.88■□□□□ 0.93
Q9CYI0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CYI0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CYI0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CYI0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CYI0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CYI0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CYI0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CYI0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CYI0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CYI0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9CYI0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q9CYI0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9CYI0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q9CYI0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Q9CYI0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9CYI0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Q9CYI0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q9CYI0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q9CYI0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q9CYI0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Q9CYI0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.85■□□□□ 0.93
Q9CYI0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Q9CYI0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Q9CYI0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q9CYI0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q9CYI0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CYI0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CYI0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CYI0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Q9CYI0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CYI0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CYI0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CYI0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CYI0 Gm13148-201ENSMUST00000118892 745 ntBASIC20.84■□□□□ 0.93
Q9CYI0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.84■□□□□ 0.93
Q9CYI0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Q9CYI0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CYI0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CYI0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CYI0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CYI0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CYI0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q9CYI0 Nespas-201ENSMUST00000143738 1083 ntBASIC20.83■□□□□ 0.93
Q9CYI0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q9CYI0 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.83■□□□□ 0.93
Q9CYI0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.83■□□□□ 0.93
Q9CYI0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q9CYI0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Q9CYI0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
Q9CYI0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CYI0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CYI0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CYI0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CYI0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CYI0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CYI0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CYI0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CYI0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CYI0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CYI0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CYI0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CYI0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CYI0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CYI0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.81■□□□□ 0.92
Q9CYI0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.81■□□□□ 0.92
Q9CYI0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CYI0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Q9CYI0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.81■□□□□ 0.92
Q9CYI0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CYI0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CYI0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CYI0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CYI0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.8■□□□□ 0.92
Q9CYI0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CYI0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CYI0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CYI0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CYI0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Q9CYI0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CYI0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Q9CYI0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CYI0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CYI0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CYI0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CYI0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CYI0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CYI0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CYI0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CYI0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.79■□□□□ 0.92
Q9CYI0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CYI0 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.79■□□□□ 0.92
Q9CYI0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CYI0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Q9CYI0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q9CYI0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms