Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chd1lQ9CXF7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.35■■□□□ 1.01
Chd1lQ9CXF7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
Chd1lQ9CXF7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chd1lQ9CXF7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chd1lQ9CXF7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd1lQ9CXF7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd1lQ9CXF7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd1lQ9CXF7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd1lQ9CXF7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd1lQ9CXF7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd1lQ9CXF7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd1lQ9CXF7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Chd1lQ9CXF7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chd1lQ9CXF7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Chd1lQ9CXF7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Chd1lQ9CXF7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chd1lQ9CXF7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.33■■□□□ 1
Chd1lQ9CXF7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chd1lQ9CXF7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.32■■□□□ 1
Chd1lQ9CXF7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chd1lQ9CXF7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chd1lQ9CXF7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Chd1lQ9CXF7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.32■■□□□ 1
Chd1lQ9CXF7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
Chd1lQ9CXF7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.32■■□□□ 1
Chd1lQ9CXF7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Chd1lQ9CXF7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.32■■□□□ 1
Chd1lQ9CXF7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd1lQ9CXF7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Chd1lQ9CXF7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1lQ9CXF7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1lQ9CXF7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1lQ9CXF7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Chd1lQ9CXF7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1lQ9CXF7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.31■■□□□ 1
Chd1lQ9CXF7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1lQ9CXF7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1lQ9CXF7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Chd1lQ9CXF7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1lQ9CXF7 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.3■■□□□ 1
Chd1lQ9CXF7 Serp2-204ENSMUST00000228055 705 ntBASIC21.3■■□□□ 1
Chd1lQ9CXF7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1lQ9CXF7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1lQ9CXF7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Chd1lQ9CXF7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1lQ9CXF7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1lQ9CXF7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1lQ9CXF7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.3■■□□□ 1
Chd1lQ9CXF7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1lQ9CXF7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.3■■□□□ 1
Chd1lQ9CXF7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1lQ9CXF7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1lQ9CXF7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Chd1lQ9CXF7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chd1lQ9CXF7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chd1lQ9CXF7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chd1lQ9CXF7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chd1lQ9CXF7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.28■■□□□ 1
Chd1lQ9CXF7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chd1lQ9CXF7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chd1lQ9CXF7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.28■■□□□ 1
Chd1lQ9CXF7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chd1lQ9CXF7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.27■■□□□ 1
Chd1lQ9CXF7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.27■■□□□ 1
Chd1lQ9CXF7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Chd1lQ9CXF7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.27■■□□□ 1
Chd1lQ9CXF7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.27■■□□□ 1
Chd1lQ9CXF7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chd1lQ9CXF7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chd1lQ9CXF7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chd1lQ9CXF7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chd1lQ9CXF7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Chd1lQ9CXF7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Chd1lQ9CXF7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Chd1lQ9CXF7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms