Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
Rnf135Q9CWS1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf135Q9CWS1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf135Q9CWS1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.65■□□□□ 0.74
Rnf135Q9CWS1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rnf135Q9CWS1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf135Q9CWS1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf135Q9CWS1 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.65■□□□□ 0.74
Rnf135Q9CWS1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf135Q9CWS1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf135Q9CWS1 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.64■□□□□ 0.74
Rnf135Q9CWS1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf135Q9CWS1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf135Q9CWS1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf135Q9CWS1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf135Q9CWS1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf135Q9CWS1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf135Q9CWS1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf135Q9CWS1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf135Q9CWS1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf135Q9CWS1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf135Q9CWS1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf135Q9CWS1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf135Q9CWS1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf135Q9CWS1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf135Q9CWS1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf135Q9CWS1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf135Q9CWS1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf135Q9CWS1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Rnf135Q9CWS1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rnf135Q9CWS1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Rnf135Q9CWS1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rnf135Q9CWS1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf135Q9CWS1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf135Q9CWS1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf135Q9CWS1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.62■□□□□ 0.73
Rnf135Q9CWS1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf135Q9CWS1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf135Q9CWS1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.62■□□□□ 0.73
Rnf135Q9CWS1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf135Q9CWS1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf135Q9CWS1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf135Q9CWS1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf135Q9CWS1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rnf135Q9CWS1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf135Q9CWS1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf135Q9CWS1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rnf135Q9CWS1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf135Q9CWS1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf135Q9CWS1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf135Q9CWS1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf135Q9CWS1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Rnf135Q9CWS1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf135Q9CWS1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf135Q9CWS1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf135Q9CWS1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rnf135Q9CWS1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf135Q9CWS1 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.6■□□□□ 0.73
Rnf135Q9CWS1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf135Q9CWS1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf135Q9CWS1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf135Q9CWS1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf135Q9CWS1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rnf135Q9CWS1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf135Q9CWS1 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.58■□□□□ 0.73
Rnf135Q9CWS1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf135Q9CWS1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf135Q9CWS1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf135Q9CWS1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.58■□□□□ 0.72
Rnf135Q9CWS1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.58■□□□□ 0.72
Rnf135Q9CWS1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf135Q9CWS1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rnf135Q9CWS1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Rnf135Q9CWS1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf135Q9CWS1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf135Q9CWS1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf135Q9CWS1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf135Q9CWS1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Rnf135Q9CWS1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Gm26833-201ENSMUST00000180899 440 ntBASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rnf135Q9CWS1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf135Q9CWS1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.56■□□□□ 0.72
Rnf135Q9CWS1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf135Q9CWS1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf135Q9CWS1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf135Q9CWS1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.56■□□□□ 0.72
Rnf135Q9CWS1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms