Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Q9CR55 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CR55 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CR55 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CR55 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Q9CR55 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CR55 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CR55 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CR55 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.46■□□□□ 0.39
Q9CR55 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.46■□□□□ 0.39
Q9CR55 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CR55 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CR55 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Q9CR55 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Q9CR55 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.45■□□□□ 0.38
Q9CR55 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 Gm13238-201ENSMUST00000117655 780 ntBASIC17.45■□□□□ 0.38
Q9CR55 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 Gm15820-201ENSMUST00000201566 728 ntBASIC17.45■□□□□ 0.38
Q9CR55 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Q9CR55 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.45■□□□□ 0.38
Q9CR55 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CR55 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Q9CR55 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Q9CR55 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CR55 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Q9CR55 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Q9CR55 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CR55 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CR55 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CR55 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CR55 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Q9CR55 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.44■□□□□ 0.38
Q9CR55 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CR55 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CR55 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CR55 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Q9CR55 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CR55 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CR55 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CR55 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CR55 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CR55 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CR55 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.43■□□□□ 0.38
Q9CR55 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.43■□□□□ 0.38
Q9CR55 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.43■□□□□ 0.38
Q9CR55 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CR55 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CR55 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CR55 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CR55 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CR55 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.43■□□□□ 0.38
Q9CR55 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CR55 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CR55 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Q9CR55 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CR55 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CR55 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CR55 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.42■□□□□ 0.38
Q9CR55 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.42■□□□□ 0.38
Q9CR55 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.42■□□□□ 0.38
Q9CR55 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CR55 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CR55 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CR55 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CR55 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CR55 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CR55 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CR55 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CR55 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CR55 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CR55 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CR55 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CR55 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Q9CR55 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CR55 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CR55 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CR55 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.4■□□□□ 0.38
Q9CR55 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CR55 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CR55 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Q9CR55 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.4■□□□□ 0.38
Q9CR55 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
Q9CR55 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Q9CR55 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CR55 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CR55 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CR55 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CR55 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CR55 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms