Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39lQ9CQD0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39lQ9CQD0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rpl39lQ9CQD0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Gm43592-201ENSMUST00000196922 1165 ntBASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39lQ9CQD0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Gm45640-201ENSMUST00000210665 1896 ntBASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39lQ9CQD0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms