Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Chchd1Q9CQA6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chchd1Q9CQA6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chchd1Q9CQA6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chchd1Q9CQA6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chchd1Q9CQA6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms