Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim16Q99PP9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim16Q99PP9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim16Q99PP9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Trim16Q99PP9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim16Q99PP9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim16Q99PP9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim16Q99PP9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim16Q99PP9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim16Q99PP9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim16Q99PP9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim16Q99PP9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim16Q99PP9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim16Q99PP9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim16Q99PP9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim16Q99PP9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim16Q99PP9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim16Q99PP9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim16Q99PP9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.4■□□□□ 0.54
Trim16Q99PP9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim16Q99PP9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim16Q99PP9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Trim16Q99PP9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.39■□□□□ 0.53
Trim16Q99PP9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.39■□□□□ 0.53
Trim16Q99PP9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Gm40848-201ENSMUST00000221998 324 ntBASIC18.39■□□□□ 0.53
Trim16Q99PP9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim16Q99PP9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim16Q99PP9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim16Q99PP9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim16Q99PP9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim16Q99PP9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim16Q99PP9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim16Q99PP9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim16Q99PP9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim16Q99PP9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim16Q99PP9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim16Q99PP9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim16Q99PP9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim16Q99PP9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim16Q99PP9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim16Q99PP9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim16Q99PP9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.37■□□□□ 0.53
Trim16Q99PP9 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.37■□□□□ 0.53
Trim16Q99PP9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim16Q99PP9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim16Q99PP9 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.37■□□□□ 0.53
Trim16Q99PP9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim16Q99PP9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim16Q99PP9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim16Q99PP9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Trim16Q99PP9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Gm15039-201ENSMUST00000118914 875 ntBASIC18.36■□□□□ 0.53
Trim16Q99PP9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim16Q99PP9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.36■□□□□ 0.53
Trim16Q99PP9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim16Q99PP9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim16Q99PP9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim16Q99PP9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim16Q99PP9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim16Q99PP9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim16Q99PP9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.35■□□□□ 0.53
Trim16Q99PP9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim16Q99PP9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim16Q99PP9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Trim16Q99PP9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim16Q99PP9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim16Q99PP9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Trim16Q99PP9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim16Q99PP9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim16Q99PP9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim16Q99PP9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim16Q99PP9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim16Q99PP9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim16Q99PP9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trim16Q99PP9 Gm43060-201ENSMUST00000200621 289 ntBASIC18.33■□□□□ 0.52
Trim16Q99PP9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms