Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC23.39■■□□□ 1.33
Trim34aQ99PP6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.39■■□□□ 1.33
Trim34aQ99PP6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim34aQ99PP6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Trim34aQ99PP6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.38■■□□□ 1.33
Trim34aQ99PP6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim34aQ99PP6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.38■■□□□ 1.33
Trim34aQ99PP6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC23.38■■□□□ 1.33
Trim34aQ99PP6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim34aQ99PP6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim34aQ99PP6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim34aQ99PP6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Trim34aQ99PP6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim34aQ99PP6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC23.37■■□□□ 1.33
Trim34aQ99PP6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim34aQ99PP6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim34aQ99PP6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim34aQ99PP6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim34aQ99PP6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trim34aQ99PP6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trim34aQ99PP6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim34aQ99PP6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim34aQ99PP6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim34aQ99PP6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34aQ99PP6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34aQ99PP6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34aQ99PP6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34aQ99PP6 Dio3-201ENSMUST00000097228 1449 ntBASIC23.36■■□□□ 1.33
Trim34aQ99PP6 Gm5643-201ENSMUST00000117081 966 ntBASIC23.36■■□□□ 1.33
Trim34aQ99PP6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC23.36■■□□□ 1.33
Trim34aQ99PP6 Gm44549-201ENSMUST00000208351 577 ntBASIC23.36■■□□□ 1.33
Trim34aQ99PP6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
Trim34aQ99PP6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34aQ99PP6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34aQ99PP6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim34aQ99PP6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim34aQ99PP6 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.35■■□□□ 1.33
Trim34aQ99PP6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC23.35■■□□□ 1.33
Trim34aQ99PP6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trim34aQ99PP6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim34aQ99PP6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim34aQ99PP6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim34aQ99PP6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Trim34aQ99PP6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC23.34■■□□□ 1.33
Trim34aQ99PP6 Gm19094-201ENSMUST00000209791 1246 ntBASIC23.34■■□□□ 1.33
Trim34aQ99PP6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim34aQ99PP6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Trim34aQ99PP6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim34aQ99PP6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim34aQ99PP6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim34aQ99PP6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim34aQ99PP6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim34aQ99PP6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trim34aQ99PP6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC23.33■■□□□ 1.33
Trim34aQ99PP6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC23.33■■□□□ 1.33
Trim34aQ99PP6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Trim34aQ99PP6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trim34aQ99PP6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trim34aQ99PP6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trim34aQ99PP6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34aQ99PP6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34aQ99PP6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34aQ99PP6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Trim34aQ99PP6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34aQ99PP6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Trim34aQ99PP6 Mir7071-201ENSMUST00000184847 69 ntBASIC23.32■■□□□ 1.32
Trim34aQ99PP6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC23.32■■□□□ 1.32
Trim34aQ99PP6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34aQ99PP6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34aQ99PP6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34aQ99PP6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34aQ99PP6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34aQ99PP6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Trim34aQ99PP6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34aQ99PP6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34aQ99PP6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34aQ99PP6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34aQ99PP6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34aQ99PP6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34aQ99PP6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34aQ99PP6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34aQ99PP6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
Trim34aQ99PP6 Mir6982-201ENSMUST00000184354 68 ntBASIC23.3■■□□□ 1.32
Trim34aQ99PP6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34aQ99PP6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34aQ99PP6 Gm43672-201ENSMUST00000199072 1731 ntBASIC23.3■■□□□ 1.32
Trim34aQ99PP6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34aQ99PP6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim34aQ99PP6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trim34aQ99PP6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Trim34aQ99PP6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim34aQ99PP6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trim34aQ99PP6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.29■■□□□ 1.32
Trim34aQ99PP6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC23.29■■□□□ 1.32
Trim34aQ99PP6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34aQ99PP6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34aQ99PP6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34aQ99PP6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34aQ99PP6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC23.28■■□□□ 1.32
Trim34aQ99PP6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms