Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh23Q99PF4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh23Q99PF4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.54■□□□□ 0.72
Cdh23Q99PF4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh23Q99PF4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdh23Q99PF4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh23Q99PF4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh23Q99PF4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Gm11539-201ENSMUST00000119837 557 ntBASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Gm13436-201ENSMUST00000120418 567 ntBASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Gm7889-201ENSMUST00000185591 958 ntBASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.53■□□□□ 0.72
Cdh23Q99PF4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Gm21814-202ENSMUST00000203277 873 ntBASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh23Q99PF4 Gm6345-202ENSMUST00000180900 204 ntBASIC19.52■□□□□ 0.71
Cdh23Q99PF4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh23Q99PF4 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.51■□□□□ 0.71
Cdh23Q99PF4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh23Q99PF4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh23Q99PF4 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.51■□□□□ 0.71
Cdh23Q99PF4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cdh23Q99PF4 AA386476-201ENSMUST00000098781 1665 ntBASIC19.51■□□□□ 0.71
Cdh23Q99PF4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh23Q99PF4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh23Q99PF4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh23Q99PF4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh23Q99PF4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Gm7860-201ENSMUST00000121190 879 ntBASIC19.49■□□□□ 0.71
Cdh23Q99PF4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Gm13158-201ENSMUST00000122007 736 ntBASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh23Q99PF4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh23Q99PF4 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.47■□□□□ 0.71
Cdh23Q99PF4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh23Q99PF4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh23Q99PF4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh23Q99PF4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh23Q99PF4 Ank2-226ENSMUST00000189368 339 ntBASIC19.47■□□□□ 0.71
Cdh23Q99PF4 Gm18101-201ENSMUST00000215769 548 ntBASIC19.47■□□□□ 0.71
Cdh23Q99PF4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms