Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trem2Q99NH8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trem2Q99NH8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.3■□□□□ 0.68
Trem2Q99NH8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trem2Q99NH8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trem2Q99NH8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.3■□□□□ 0.68
Trem2Q99NH8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trem2Q99NH8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.29■□□□□ 0.68
Trem2Q99NH8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trem2Q99NH8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trem2Q99NH8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trem2Q99NH8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Gm38205-201ENSMUST00000192243 258 ntBASIC19.28■□□□□ 0.68
Trem2Q99NH8 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.28■□□□□ 0.68
Trem2Q99NH8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trem2Q99NH8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trem2Q99NH8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trem2Q99NH8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trem2Q99NH8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trem2Q99NH8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trem2Q99NH8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trem2Q99NH8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trem2Q99NH8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Trem2Q99NH8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trem2Q99NH8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trem2Q99NH8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trem2Q99NH8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trem2Q99NH8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trem2Q99NH8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trem2Q99NH8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Trem2Q99NH8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trem2Q99NH8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.26■□□□□ 0.67
Trem2Q99NH8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trem2Q99NH8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trem2Q99NH8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trem2Q99NH8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trem2Q99NH8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.25■□□□□ 0.67
Trem2Q99NH8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.25■□□□□ 0.67
Trem2Q99NH8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trem2Q99NH8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trem2Q99NH8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trem2Q99NH8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.25■□□□□ 0.67
Trem2Q99NH8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trem2Q99NH8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trem2Q99NH8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trem2Q99NH8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Trem2Q99NH8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trem2Q99NH8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trem2Q99NH8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trem2Q99NH8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trem2Q99NH8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.24■□□□□ 0.67
Trem2Q99NH8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trem2Q99NH8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms