Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cstf1Q99LC2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cstf1Q99LC2 Dio3-201ENSMUST00000097228 1449 ntBASIC18.84■□□□□ 0.61
Cstf1Q99LC2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cstf1Q99LC2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cstf1Q99LC2 Gm11643-201ENSMUST00000119578 864 ntBASIC18.84■□□□□ 0.61
Cstf1Q99LC2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.84■□□□□ 0.61
Cstf1Q99LC2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.84■□□□□ 0.61
Cstf1Q99LC2 Gm37055-201ENSMUST00000191866 133 ntBASIC18.84■□□□□ 0.61
Cstf1Q99LC2 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.84■□□□□ 0.61
Cstf1Q99LC2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cstf1Q99LC2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cstf1Q99LC2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.84■□□□□ 0.61
Cstf1Q99LC2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cstf1Q99LC2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.83■□□□□ 0.61
Cstf1Q99LC2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cstf1Q99LC2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cstf1Q99LC2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cstf1Q99LC2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cstf1Q99LC2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cstf1Q99LC2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cstf1Q99LC2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cstf1Q99LC2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Gm18666-201ENSMUST00000190039 958 ntBASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf1Q99LC2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf1Q99LC2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf1Q99LC2 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.8■□□□□ 0.6
Cstf1Q99LC2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf1Q99LC2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf1Q99LC2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf1Q99LC2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf1Q99LC2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf1Q99LC2 Gm9987-201ENSMUST00000069768 567 ntBASIC18.8■□□□□ 0.6
Cstf1Q99LC2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cstf1Q99LC2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf1Q99LC2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cstf1Q99LC2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf1Q99LC2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf1Q99LC2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cstf1Q99LC2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cstf1Q99LC2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cstf1Q99LC2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cstf1Q99LC2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cstf1Q99LC2 Gm10698-201ENSMUST00000182663 604 ntBASIC18.78■□□□□ 0.6
Cstf1Q99LC2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cstf1Q99LC2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cstf1Q99LC2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cstf1Q99LC2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cstf1Q99LC2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cstf1Q99LC2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cstf1Q99LC2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Cstf1Q99LC2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Cstf1Q99LC2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cstf1Q99LC2 Gm11249-201ENSMUST00000117071 859 ntBASIC18.77■□□□□ 0.6
Cstf1Q99LC2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms