Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.71■■□□□ 1.07
Smc1bQ920F6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc1bQ920F6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc1bQ920F6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smc1bQ920F6 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.7■■□□□ 1.06
Smc1bQ920F6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc1bQ920F6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc1bQ920F6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc1bQ920F6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smc1bQ920F6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc1bQ920F6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smc1bQ920F6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.69■■□□□ 1.06
Smc1bQ920F6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.69■■□□□ 1.06
Smc1bQ920F6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc1bQ920F6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.69■■□□□ 1.06
Smc1bQ920F6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc1bQ920F6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smc1bQ920F6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Smc1bQ920F6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.68■■□□□ 1.06
Smc1bQ920F6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Smc1bQ920F6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Smc1bQ920F6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc1bQ920F6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc1bQ920F6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc1bQ920F6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc1bQ920F6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Smc1bQ920F6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc1bQ920F6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.67■■□□□ 1.06
Smc1bQ920F6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc1bQ920F6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Smc1bQ920F6 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.67■■□□□ 1.06
Smc1bQ920F6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.67■■□□□ 1.06
Smc1bQ920F6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.67■■□□□ 1.06
Smc1bQ920F6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc1bQ920F6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc1bQ920F6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc1bQ920F6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc1bQ920F6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc1bQ920F6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc1bQ920F6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc1bQ920F6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc1bQ920F6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc1bQ920F6 Gm6211-202ENSMUST00000167849 925 ntBASIC21.66■■□□□ 1.06
Smc1bQ920F6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc1bQ920F6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc1bQ920F6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc1bQ920F6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smc1bQ920F6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc1bQ920F6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.65■■□□□ 1.06
Smc1bQ920F6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc1bQ920F6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.65■■□□□ 1.06
Smc1bQ920F6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Smc1bQ920F6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
Smc1bQ920F6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Smc1bQ920F6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smc1bQ920F6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc1bQ920F6 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.64■■□□□ 1.05
Smc1bQ920F6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.64■■□□□ 1.05
Smc1bQ920F6 Trmt13-210ENSMUST00000198454 880 ntBASIC21.64■■□□□ 1.05
Smc1bQ920F6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc1bQ920F6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc1bQ920F6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc1bQ920F6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Gm6420-201ENSMUST00000193885 723 ntBASIC21.63■■□□□ 1.05
Smc1bQ920F6 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.63■■□□□ 1.05
Smc1bQ920F6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc1bQ920F6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc1bQ920F6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smc1bQ920F6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc1bQ920F6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc1bQ920F6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.62■■□□□ 1.05
Smc1bQ920F6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smc1bQ920F6 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.62■■□□□ 1.05
Smc1bQ920F6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc1bQ920F6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc1bQ920F6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms