Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Gm5075-201ENSMUST00000196916 622 ntBASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Iqck-206ENSMUST00000208658 2891 ntBASIC19.69■□□□□ 0.74
Pcdha1Q91Y21 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
Pcdha1Q91Y21 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha1Q91Y21 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha1Q91Y21 Nespas-201ENSMUST00000143738 1083 ntBASIC19.69■□□□□ 0.74
Pcdha1Q91Y21 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.69■□□□□ 0.74
Pcdha1Q91Y21 Gm6365-201ENSMUST00000054711 744 ntBASIC19.69■□□□□ 0.74
Pcdha1Q91Y21 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha1Q91Y21 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdha1Q91Y21 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.69■□□□□ 0.74
Pcdha1Q91Y21 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha1Q91Y21 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha1Q91Y21 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha1Q91Y21 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha1Q91Y21 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha1Q91Y21 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.68■□□□□ 0.74
Pcdha1Q91Y21 Gm13148-201ENSMUST00000118892 745 ntBASIC19.68■□□□□ 0.74
Pcdha1Q91Y21 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha1Q91Y21 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdha1Q91Y21 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha1Q91Y21 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha1Q91Y21 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha1Q91Y21 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdha1Q91Y21 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha1Q91Y21 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha1Q91Y21 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha1Q91Y21 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha1Q91Y21 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha1Q91Y21 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha1Q91Y21 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Pcdha1Q91Y21 Gm12441-201ENSMUST00000121806 588 ntBASIC19.67■□□□□ 0.74
Pcdha1Q91Y21 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdha1Q91Y21 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdha1Q91Y21 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdha1Q91Y21 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha1Q91Y21 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha1Q91Y21 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha1Q91Y21 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha1Q91Y21 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha1Q91Y21 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha1Q91Y21 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha1Q91Y21 Gm4968-201ENSMUST00000071458 858 ntBASIC19.66■□□□□ 0.74
Pcdha1Q91Y21 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha1Q91Y21 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha1Q91Y21 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdha1Q91Y21 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha1Q91Y21 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha1Q91Y21 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha1Q91Y21 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdha1Q91Y21 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Pcdha1Q91Y21 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.64■□□□□ 0.74
Pcdha1Q91Y21 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha1Q91Y21 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Pcdha1Q91Y21 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdha1Q91Y21 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha1Q91Y21 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha1Q91Y21 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha1Q91Y21 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha1Q91Y21 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha1Q91Y21 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha1Q91Y21 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms