Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Gm38205-201ENSMUST00000192243 258 ntBASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb1Q91Y08 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb1Q91Y08 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Pcdhb1Q91Y08 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhb1Q91Y08 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb1Q91Y08 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdhb1Q91Y08 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb1Q91Y08 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhb1Q91Y08 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb1Q91Y08 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb1Q91Y08 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdhb1Q91Y08 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb1Q91Y08 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhb1Q91Y08 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb1Q91Y08 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb1Q91Y08 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhb1Q91Y08 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhb1Q91Y08 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb1Q91Y08 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdhb1Q91Y08 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb1Q91Y08 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb1Q91Y08 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb1Q91Y08 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdhb1Q91Y08 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Pcdhb1Q91Y08 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb1Q91Y08 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdhb1Q91Y08 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb1Q91Y08 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb1Q91Y08 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdhb1Q91Y08 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb1Q91Y08 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Pcdhb1Q91Y08 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb1Q91Y08 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb1Q91Y08 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.62■□□□□ 0.73
Pcdhb1Q91Y08 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb1Q91Y08 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb1Q91Y08 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb1Q91Y08 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb1Q91Y08 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb1Q91Y08 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb1Q91Y08 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb1Q91Y08 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.6■□□□□ 0.73
Pcdhb1Q91Y08 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb1Q91Y08 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb1Q91Y08 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb1Q91Y08 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.6■□□□□ 0.73
Pcdhb1Q91Y08 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb1Q91Y08 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb1Q91Y08 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb1Q91Y08 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb1Q91Y08 Gm9988-201ENSMUST00000069786 435 ntBASIC19.59■□□□□ 0.73
Pcdhb1Q91Y08 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms