Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb4Q91XZ6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb4Q91XZ6 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.72■□□□□ 0.59
Pcdhb4Q91XZ6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb4Q91XZ6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb4Q91XZ6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb4Q91XZ6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb4Q91XZ6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdhb4Q91XZ6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb4Q91XZ6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdhb4Q91XZ6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb4Q91XZ6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb4Q91XZ6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb4Q91XZ6 Gm27454-201ENSMUST00000185090 204 ntBASIC18.7■□□□□ 0.58
Pcdhb4Q91XZ6 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.7■□□□□ 0.58
Pcdhb4Q91XZ6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.7■□□□□ 0.58
Pcdhb4Q91XZ6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb4Q91XZ6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb4Q91XZ6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb4Q91XZ6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb4Q91XZ6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb4Q91XZ6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdhb4Q91XZ6 Gm8493-201ENSMUST00000196881 489 ntBASIC18.69■□□□□ 0.58
Pcdhb4Q91XZ6 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.69■□□□□ 0.58
Pcdhb4Q91XZ6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb4Q91XZ6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb4Q91XZ6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhb4Q91XZ6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb4Q91XZ6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb4Q91XZ6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Smad6-203ENSMUST00000179458 273 ntBASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.67■□□□□ 0.58
Pcdhb4Q91XZ6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Gm43173-201ENSMUST00000202246 593 ntBASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb4Q91XZ6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms