Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb6Q91XZ4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Gm13146-201ENSMUST00000118508 780 ntBASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb6Q91XZ4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.43■□□□□ 0.7
Pcdhb6Q91XZ4 Reep4-203ENSMUST00000226563 1444 ntBASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Gm9988-201ENSMUST00000069786 435 ntBASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb6Q91XZ4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb6Q91XZ4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb6Q91XZ4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb6Q91XZ4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb6Q91XZ4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb6Q91XZ4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdhb6Q91XZ4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb6Q91XZ4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb6Q91XZ4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb6Q91XZ4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb6Q91XZ4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb6Q91XZ4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb6Q91XZ4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb6Q91XZ4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Pcdhb6Q91XZ4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb6Q91XZ4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb6Q91XZ4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb6Q91XZ4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb6Q91XZ4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms