Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga3Q91XY5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga3Q91XY5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga3Q91XY5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga3Q91XY5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhga3Q91XY5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga3Q91XY5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga3Q91XY5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pcdhga3Q91XY5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga3Q91XY5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdhga3Q91XY5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdhga3Q91XY5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga3Q91XY5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga3Q91XY5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga3Q91XY5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga3Q91XY5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga3Q91XY5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms