Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh18Q8VHR0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh18Q8VHR0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh18Q8VHR0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh18Q8VHR0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh18Q8VHR0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh18Q8VHR0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh18Q8VHR0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh18Q8VHR0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh18Q8VHR0 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.11■□□□□ 0.49
Pcdh18Q8VHR0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh18Q8VHR0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh18Q8VHR0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh18Q8VHR0 BC021767-201ENSMUST00000126387 1716 ntBASIC18.09■□□□□ 0.49
Pcdh18Q8VHR0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh18Q8VHR0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh18Q8VHR0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh18Q8VHR0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.09■□□□□ 0.49
Pcdh18Q8VHR0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh18Q8VHR0 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.09■□□□□ 0.49
Pcdh18Q8VHR0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh18Q8VHR0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdh18Q8VHR0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh18Q8VHR0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh18Q8VHR0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh18Q8VHR0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh18Q8VHR0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh18Q8VHR0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdh18Q8VHR0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.08■□□□□ 0.48
Pcdh18Q8VHR0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdh18Q8VHR0 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.08■□□□□ 0.48
Pcdh18Q8VHR0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
Pcdh18Q8VHR0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh18Q8VHR0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh18Q8VHR0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh18Q8VHR0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh18Q8VHR0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
Pcdh18Q8VHR0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Pcdh18Q8VHR0 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms